Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006867.1 Hibiscus syriacus cultivar Beakdansim tig00017477_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63294

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23154--23205
17
3.1
17
76
13
54
44
1
1
51
1.23
23268--23387
62
2.0
57
85
7
159
45
8
14
32
1.74
24400--24425
2
13.0
2
100
0
52
50
0
0
50
1.00
24719--24753
18
1.9
18
94
0
61
51
0
0
48
1.00
25319--25360
22
1.9
22
90
0
66
59
0
2
38
1.10
27358--27384
13
2.1
13
100
0
54
22
7
0
70
1.12
28514--29086
134
4.3
134
85
1
747
28
18
23
30
1.98
28513--29086
267
2.1
268
85
4
782
28
18
23
29
1.97
51261--51292
16
2.0
16
93
0
55
53
6
3
37
1.42
54340--54382
18
2.4
18
88
0
59
18
6
0
74
1.04
54423--54512
36
2.5
35
82
12
103
25
5
0
68
1.11
54466--54516
20
2.5
20
75
9
50
27
3
0
68
1.07
59517--59543
14
1.9
14
100
0
54
14
3
0
81
0.82
59516--59610
5
19.2
5
68
25
60
20
5
1
73
1.08
61522--61623
19
5.4
19
65
27
56
28
0
11
58
1.39
61466--61691
76
3.0
76
94
2
384
27
1
11
59
1.42
61861--62067
100
2.1
100
97
0
387
31
16
18
33
1.93
62398--62439
18
2.3
18
100
0
84
21
4
0
73
1.01

Tables:   1

The End!