Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006870.1 Hibiscus syriacus cultivar Beakdansim tig00017495_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72906

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10572--10654
6
13.0
6
70
12
58
15
7
3
73
1.19
10578--10630
22
2.7
20
82
14
65
16
9
3
69
1.30
10609--10656
25
1.9
25
87
8
71
14
8
2
75
1.13
10572--10658
12
6.8
12
71
17
68
14
8
3
73
1.20
18705--18993
43
6.7
43
83
4
325
18
23
23
35
1.96
18931--19020
43
2.1
42
81
6
101
24
23
18
33
1.97
20952--20991
11
3.6
11
86
0
53
22
35
17
25
1.95
23425--23577
43
3.5
43
86
0
207
18
22
23
34
1.96
25309--25350
22
1.9
21
85
9
57
26
21
16
35
1.94
25514--25553
11
3.6
11
86
0
53
22
32
22
22
1.98
27984--28179
43
4.5
43
86
0
248
18
21
23
36
1.95
32667--32713
19
2.4
20
82
13
62
34
0
0
65
0.93
35043--35081
18
2.2
18
85
0
51
15
2
5
76
1.06
36104--36142
16
2.4
17
95
4
71
23
5
41
30
1.76
38651--39605
106
9.0
106
98
0
1739
33
25
18
22
1.97
39508--39657
43
3.4
43
70
13
144
34
25
19
20
1.96
39548--39680
43
3.0
43
67
16
128
34
25
20
19
1.96
39507--39680
88
2.0
88
98
0
339
34
25
19
20
1.96
39503--39734
88
2.6
86
83
13
267
34
25
18
21
1.96
39912--39975
18
3.5
20
75
16
66
37
0
0
62
0.95
42281--42319
18
2.2
18
85
0
51
15
2
5
76
1.06
44725--44761
14
2.6
14
100
0
74
45
27
8
18
1.77
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45550--45593
22
2.2
19
84
12
52
13
9
0
77
0.99
46011--46060
13
3.9
12
82
17
57
18
8
0
74
1.06
51167--51387
45
4.9
45
89
7
342
32
22
6
38
1.81
51503--51624
59
2.1
59
90
0
190
29
23
17
29
1.97
56871--57015
22
6.5
22
70
23
90
65
1
3
29
1.17
56871--57001
66
2.0
65
81
10
151
66
0
3
29
1.14
57714--57806
37
2.5
37
75
6
89
32
15
11
40
1.83
58537--59707
106
11.0
106
91
0
1714
22
18
24
34
1.96
60651--60705
22
2.5
22
93
0
92
25
10
27
36
1.89
61325--61383
15
4.3
14
79
10
68
0
11
5
83
0.81
61340--61383
9
4.6
9
86
13
61
0
11
4
84
0.77
61325--61375
17
3.3
15
86
8
59
0
11
5
82
0.83
61333--61383
26
1.9
27
84
11
70
0
13
3
82
0.81
61337--61392
25
2.2
25
78
6
60
0
16
5
78
0.92
64738--64774
19
1.9
19
89
10
58
67
0
24
8
1.17
66302--66336
2
17.5
2
100
0
70
51
0
0
48
1.00
66790--66879
37
2.4
37
84
0
108
31
14
15
38
1.87

Tables:   1

The End!