Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006875.1 Hibiscus syriacus cultivar Beakdansim tig00017512_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67661

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
810--877
31
2.2
31
89
5
102
51
10
8
29
1.66
12257--12286
15
2.0
15
93
0
51
70
0
0
30
0.88
12800--12843
19
2.3
19
84
0
61
56
0
2
40
1.11
12803--12843
20
2.1
19
86
13
57
53
0
2
43
1.13
13729--13840
31
3.6
31
96
0
197
41
24
16
17
1.90
14103--14172
34
2.1
32
89
5
104
21
31
15
31
1.95
14547--14637
31
3.0
31
93
3
150
42
17
6
32
1.75
16437--16616
98
1.8
98
96
0
333
32
8
18
40
1.81
23624--23666
21
2.0
21
86
0
59
44
4
23
27
1.73
24019--24059
21
2.0
21
85
0
55
65
9
2
21
1.34
25690--25894
31
6.6
31
94
0
356
39
22
19
19
1.93
33681--33741
21
3.2
21
65
29
64
31
4
21
42
1.74
33680--33789
35
3.1
35
90
5
168
32
5
18
43
1.73
38370--38456
23
3.7
23
76
14
88
26
26
26
20
1.99
44901--44926
2
13.0
2
100
0
52
50
0
0
50
1.00
55223--55263
20
2.0
20
100
0
82
43
46
0
9
1.36
55679--55724
23
2.0
23
100
0
92
47
8
26
17
1.76
56782--56832
20
2.5
20
83
3
57
58
5
1
33
1.33

Tables:   1

The End!