Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006879.1 Hibiscus syriacus cultivar Beakdansim tig00017525_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  97812

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
598--634
2
19.0
2
94
5
67
51
0
0
48
1.00
11338--11362
2
12.5
2
100
0
50
52
0
0
48
1.00
11495--11561
31
2.2
31
86
0
89
47
10
19
22
1.79
14103--14146
21
2.1
21
82
0
52
20
0
27
52
1.47
17511--17628
60
2.0
60
83
3
148
35
16
15
32
1.90
19645--19696
27
1.9
27
88
0
77
30
9
13
46
1.75
21501--21532
15
2.1
15
100
0
64
50
25
6
18
1.70
43331--43389
30
2.0
30
100
0
118
27
6
11
54
1.62
43634--43666
16
2.1
16
94
0
57
78
6
9
6
1.08
43976--44015
18
2.2
19
90
4
64
62
2
2
32
1.22
43987--44026
18
2.2
18
86
0
53
67
0
0
32
0.91
45262--45533
136
2.0
136
100
0
544
34
17
8
39
1.79
50251--50286
18
1.9
19
94
5
65
30
0
22
47
1.52
65105--65351
122
2.0
122
98
0
476
34
24
19
21
1.97
66668--66731
32
2.0
33
87
3
94
62
6
17
14
1.51
74853--74890
15
2.4
16
91
8
60
34
5
0
60
1.19
74959--74997
2
19.5
2
100
0
78
51
0
0
48
1.00
79889--79927
20
2.0
20
89
0
60
28
10
2
58
1.44
84472--84509
20
1.9
20
84
10
51
28
5
13
52
1.61
84585--84689
51
2.1
50
83
5
131
38
8
13
40
1.75
84968--85024
31
1.9
30
89
7
89
42
12
10
35
1.77
94875--94917
19
2.3
19
95
0
77
67
9
6
16
1.40

Tables:   1

The End!