Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006885.1 Hibiscus syriacus cultivar Beakdansim tig00017551_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  105096

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2193--2232
5
8.0
5
88
0
53
15
40
37
7
1.75
8097--8137
5
8.2
5
86
0
55
21
34
39
4
1.75
8096--8142
15
3.1
15
84
0
58
19
31
38
10
1.86
14017--14050
10
3.4
10
87
0
50
11
38
41
8
1.73
17547--17602
23
2.4
23
93
0
94
30
10
21
37
1.87
21946--22168
45
4.9
47
88
5
327
41
6
21
31
1.78
21971--22168
92
2.2
91
91
4
326
41
5
21
31
1.76
30317--30379
30
2.1
30
100
0
126
44
17
22
15
1.86
36621--36683
30
2.1
30
100
0
126
44
17
22
15
1.86
38982--40397
726
2.0
721
79
6
1542
36
13
11
37
1.82
42446--42489
22
1.9
22
81
9
52
36
9
0
54
1.32
42478--42523
22
2.2
22
85
11
62
45
4
0
50
1.21
82886--82926
17
2.4
17
95
0
73
31
12
31
24
1.92
86850--86885
14
2.5
14
90
4
54
63
0
11
25
1.27
92411--92440
14
2.1
14
93
0
51
63
0
10
26
1.26
98376--98413
13
3.0
13
84
3
51
44
10
0
44
1.38
98535--98573
18
2.4
15
87
12
51
66
0
0
33
0.92
98524--98567
6
7.2
6
80
14
54
63
2
0
34
1.07

Tables:   1

The End!