Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006887.1 Hibiscus syriacus cultivar Beakdansim tig00017571_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  112567

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
151--220
34
2.1
32
86
5
95
32
15
30
21
1.94
1693--1730
19
2.0
20
94
5
69
42
7
18
31
1.79
2998--3057
29
2.0
31
90
6
97
35
6
16
41
1.75
3122--3188
19
3.5
19
87
0
89
41
10
11
35
1.76
3294--3335
21
2.0
21
95
0
75
23
21
28
26
1.99
3364--3403
20
1.9
21
85
10
55
37
37
10
15
1.80
3619--3688
34
2.1
32
84
5
86
34
15
28
21
1.94
5567--5765
99
2.0
99
99
0
389
36
17
21
25
1.94
7254--7317
30
2.1
30
97
0
119
37
3
15
43
1.63
19099--19133
17
2.1
17
94
0
61
31
0
5
62
1.18
24482--24525
22
2.2
19
84
12
52
31
0
4
63
1.14
26036--26329
111
2.6
110
86
2
390
33
12
32
21
1.90
29814--29841
2
14.0
2
100
0
56
0
50
0
50
1.00
40953--40981
2
14.5
2
100
0
58
51
0
0
48
1.00
42901--42942
6
7.5
6
97
2
63
28
54
16
0
1.42
42905--42945
5
7.6
5
97
2
55
26
53
19
0
1.45
43411--43467
20
2.8
21
86
2
80
28
28
21
22
1.99
53706--53773
32
2.1
32
83
0
82
50
16
14
19
1.79
58872--59262
186
2.1
186
90
1
617
45
7
4
42
1.51
59793--59845
11
4.6
11
79
6
52
33
1
0
64
1.05
59800--59855
25
2.2
25
81
6
69
33
3
0
62
1.12
71739--71789
23
2.2
22
83
13
59
25
11
17
45
1.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
71751--71800
24
2.1
23
85
7
64
30
6
20
44
1.75
75494--75524
2
15.5
2
100
0
62
51
0
0
48
1.00
76269--76307
20
1.9
21
89
5
62
28
0
5
66
1.12
76788--76918
60
2.2
59
81
9
142
33
13
16
35
1.88
80960--80984
13
1.9
13
100
0
50
44
0
0
56
0.99
81068--81151
31
2.8
30
65
18
75
36
14
14
34
1.86
81035--81151
60
2.0
60
86
3
164
35
14
13
36
1.86
82379--82586
75
2.8
75
85
2
256
24
30
23
21
1.99
88300--88336
18
2.0
19
94
5
67
21
37
27
13
1.91
90906--91113
75
2.8
75
82
2
240
25
30
23
21
1.99
91850--91909
22
2.7
22
86
0
75
25
21
20
33
1.97
96778--96828
22
2.3
22
96
0
93
66
1
3
27
1.20
97727--97774
24
2.0
24
88
4
71
20
10
20
47
1.79
102722--103401
213
3.2
211
86
3
884
36
10
9
42
1.72
107562--107697
67
2.0
68
94
4
240
33
11
2
52
1.49
107847--107957
58
1.9
58
83
7
145
49
9
6
35
1.60
108804--108861
30
1.9
30
85
0
80
13
22
34
29
1.93
109556--109633
32
2.2
38
82
15
96
30
7
5
56
1.49

Tables:   1

The End!