Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006889.1 Hibiscus syriacus cultivar Beakdansim tig00017575_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33567

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--146
52
2.9
50
85
10
210
29
8
12
49
1.71
1--154
46
3.2
47
90
6
229
29
8
12
50
1.69
221--345
53
2.4
52
84
12
166
31
4
10
54
1.53
509--552
22
1.9
24
90
9
74
36
4
6
52
1.49
12218--12304
16
5.0
16
76
23
79
78
0
12
9
0.97
12239--12290
10
5.3
10
76
19
56
80
0
11
7
0.89
12222--12304
28
3.0
27
83
11
107
78
0
13
8
0.96
12222--12304
26
3.1
26
83
13
105
78
0
13
8
0.96
12230--12296
17
3.7
18
80
9
59
79
0
11
8
0.95
12218--12296
8
10.1
8
72
21
53
78
0
11
10
0.97
12231--12302
16
3.9
19
80
20
82
77
0
13
8
0.98
12231--12304
13
5.5
13
70
23
55
78
0
13
8
0.96
13458--13542
35
2.4
35
100
0
170
43
12
22
21
1.86
13489--13723
105
2.2
105
96
0
436
40
16
18
24
1.91
13894--13958
3
21.7
3
96
0
121
33
0
1
64
1.03
15302--15334
15
2.2
16
89
10
52
27
0
3
69
1.03
15877--15907
2
15.5
2
100
0
62
48
0
0
51
1.00
15894--16111
49
4.4
49
94
2
359
29
7
11
50
1.66
16179--16309
58
2.3
58
94
4
230
32
4
9
53
1.53
16371--16449
2
40.0
2
97
2
151
49
0
0
50
1.00
23347--23407
23
2.7
23
71
0
59
26
13
18
42
1.86
23259--23419
81
2.0
81
91
0
259
23
13
18
44
1.85

Tables:   1

The End!