Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006897.1 Hibiscus syriacus cultivar Beakdansim tig00017613_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  88468

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2819--2863
21
2.2
20
84
4
54
57
0
20
22
1.40
3406--3457
24
2.2
25
83
13
74
69
3
5
21
1.26
12373--12404
15
2.1
15
94
0
55
53
15
25
6
1.65
15551--15624
26
2.7
27
89
6
114
31
29
17
21
1.96
15605--15640
18
2.0
18
94
0
63
19
33
22
25
1.97
16300--16349
25
2.0
25
92
0
82
22
18
14
46
1.84
20780--20809
15
2.0
15
100
0
60
26
13
20
40
1.89
22071--22129
29
2.0
29
96
0
109
23
11
13
50
1.74
26714--26772
29
2.0
29
93
0
100
25
15
13
45
1.82
33670--33712
20
2.3
18
88
8
59
72
0
18
9
1.11
46280--46313
12
2.9
12
86
4
52
50
8
11
29
1.69
52491--52535
21
2.2
20
84
4
54
57
0
20
22
1.40
53080--53132
25
2.2
24
90
6
81
69
3
5
20
1.25
62055--62086
15
2.1
15
94
0
55
53
15
25
6
1.65
64944--64968
2
12.5
2
100
0
50
52
0
0
48
1.00
65244--65317
26
2.7
27
89
6
114
31
29
17
21
1.96
65298--65333
18
2.0
18
94
0
63
19
33
22
25
1.97
65996--66045
25
2.0
25
92
0
82
22
18
14
46
1.84
70479--70508
15
2.0
15
100
0
60
26
13
20
40
1.89
71771--71829
29
2.0
29
96
0
109
23
11
13
50
1.74
76420--76478
29
2.0
29
93
0
100
25
15
13
45
1.82
83380--83417
18
2.2
17
86
13
51
71
0
18
10
1.14

Tables:   1

The End!