Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006899.1 Hibiscus syriacus cultivar Beakdansim tig00017619_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54813

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6830--6875
22
2.1
22
84
8
58
69
2
0
28
1.00
8369--8475
37
2.9
37
97
0
196
28
16
16
38
1.91
10175--10227
23
2.3
24
78
12
67
41
0
0
58
0.98
12239--12385
76
1.9
76
83
5
190
38
14
6
40
1.73
12692--12726
13
2.7
13
83
16
54
11
40
8
40
1.72
17379--17441
29
2.2
29
85
5
83
26
39
12
20
1.89
31573--31613
18
2.3
18
91
0
64
41
24
12
21
1.87
32386--32433
22
2.1
23
92
3
80
29
22
27
20
1.99
33380--33408
2
14.5
2
100
0
58
51
0
0
48
1.00
33392--33710
37
8.6
36
84
7
358
46
2
7
43
1.46
33392--33710
73
4.3
73
83
8
371
46
2
7
43
1.46
33716--33778
26
2.3
27
79
15
67
15
4
7
71
1.27
37806--37957
18
8.4
18
69
22
88
63
1
7
26
1.31
37920--37962
21
2.0
21
86
0
59
69
4
4
20
1.25
37806--37957
3
50.7
3
70
14
73
63
1
7
26
1.31
39979--40106
69
1.9
68
83
4
170
21
21
26
31
1.98
40251--40655
110
3.7
110
95
0
711
25
18
22
32
1.97
41736--42000
95
2.7
98
83
6
335
31
16
16
35
1.92
51459--51624
90
1.9
88
93
3
280
36
11
7
45
1.68
54413--54442
3
10.3
3
92
7
53
70
0
0
30
0.88
54573--54631
31
1.9
32
86
6
86
64
1
8
25
1.31

Tables:   1

The End!