Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006903.1 Hibiscus syriacus cultivar Beakdansim tig00017630_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50512

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7525--7574
21
2.5
20
87
9
66
32
10
24
34
1.88
8397--8436
20
2.0
20
90
0
62
17
37
27
17
1.92
9348--9436
24
3.8
24
86
4
119
21
25
23
29
1.99
9346--9436
48
1.9
47
88
6
139
20
26
24
28
1.99
11755--11805
22
2.1
25
82
13
63
35
7
7
49
1.61
16076--16109
16
2.1
16
100
0
68
29
23
35
11
1.90
18832--18881
21
2.5
20
87
9
66
32
10
24
34
1.88
21063--21112
21
2.5
20
87
9
66
32
10
24
34
1.88
23296--23345
21
2.5
20
87
9
66
32
10
24
34
1.88
23911--23961
2
25.5
2
100
0
102
49
0
0
50
1.00
24212--24266
24
2.3
24
87
0
74
23
23
16
36
1.94
33892--33941
21
2.5
20
87
9
66
32
10
24
34
1.88
34760--34797
19
2.0
19
89
0
58
18
34
28
18
1.95
35705--35777
24
3.1
24
90
2
112
19
26
26
28
1.98
42389--42421
15
2.1
16
94
5
59
33
18
36
12
1.88
45127--45176
21
2.5
20
87
9
66
32
10
24
34
1.88
50127--50180
2
28.0
2
92
7
94
48
0
0
51
1.00
50425--50481
23
2.4
23
82
2
69
22
24
17
35
1.95

Tables:   1

The End!