Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006905.1 Hibiscus syriacus cultivar Beakdansim tig00017640_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67548

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19162--19187
10
2.6
10
100
0
52
73
0
26
0
0.84
24884--24937
28
1.9
28
100
0
108
25
18
12
42
1.86
26280--26332
27
2.0
27
92
3
90
71
7
3
16
1.24
28016--28070
24
2.3
24
70
14
60
7
14
10
67
1.41
44814--44867
19
2.7
20
91
5
83
33
12
7
46
1.70
47583--47664
28
2.9
28
98
0
155
26
18
12
42
1.85
54556--54591
18
1.9
18
88
5
54
0
11
11
77
0.99
54575--54603
13
2.2
13
100
0
58
0
13
6
79
0.93
54556--54592
20
1.9
20
88
5
58
0
10
10
78
0.97
54549--54615
20
3.3
19
74
14
53
0
10
14
74
1.07
54967--55005
15
2.5
15
87
4
51
69
2
10
17
1.28
55385--55487
50
2.2
47
81
14
117
50
14
1
33
1.54

Tables:   1

The End!