Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006910.1 Hibiscus syriacus cultivar Beakdansim tig00017688_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74097

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
195--228
13
2.6
14
86
13
54
44
8
5
41
1.60
11848--11875
7
4.0
7
100
0
56
28
0
42
28
1.56
17337--17555
111
2.0
111
98
0
420
38
5
7
47
1.57
17636--17677
16
2.5
17
80
3
50
35
0
0
64
0.94
20369--20428
31
2.0
30
84
15
79
35
6
8
50
1.59
20675--20957
145
2.0
144
86
6
394
38
5
8
46
1.58
20675--21011
145
2.3
145
80
5
362
38
5
8
47
1.58
20985--21081
37
2.8
33
83
7
97
48
4
2
45
1.33
21021--21094
37
2.0
37
91
0
121
54
5
1
39
1.32
25971--26021
22
2.3
21
83
9
66
19
0
5
74
1.02
25973--26007
18
1.9
18
88
11
54
22
0
2
74
0.95
26085--26124
20
2.0
20
90
4
64
42
0
5
52
1.23
27364--27396
16
2.1
16
100
0
66
33
12
12
42
1.79
30682--30715
17
2.0
18
88
11
54
20
5
0
73
1.04
32171--32247
29
2.7
28
81
4
73
41
5
7
45
1.55
32232--32307
29
2.6
29
93
0
125
47
13
3
35
1.61
61460--61520
28
2.3
27
82
5
79
52
8
1
37
1.41
61532--61561
15
2.1
14
93
6
51
36
0
3
60
1.14
63375--63477
54
1.9
54
83
0
134
50
3
9
35
1.54
63732--63806
35
2.3
35
81
9
86
48
1
14
36
1.53
71483--71525
15
2.8
16
86
6
54
46
13
2
37
1.57
71747--71808
31
2.0
31
96
0
115
35
8
29
27
1.85

Tables:   1

The End!