Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006914.1 Hibiscus syriacus cultivar Beakdansim tig00017712_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45799

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3433--3466
10
3.5
10
84
8
52
52
0
0
47
1.00
3433--3471
19
2.1
19
85
4
53
58
0
0
41
0.98
4300--4334
2
18.0
2
88
5
54
48
2
0
48
1.16
4891--4958
31
2.2
31
82
14
88
61
5
0
32
1.20
6413--6966
105
5.3
105
92
4
937
23
18
25
32
1.97
6413--6966
207
2.7
205
92
4
918
23
18
25
32
1.97
17136--17197
10
6.3
10
77
5
56
74
1
6
17
1.11
18458--18507
16
3.1
16
76
0
55
64
2
2
32
1.16
20582--20637
31
1.9
27
86
13
76
25
7
7
60
1.48
21373--21414
11
3.8
11
84
12
59
28
2
0
69
1.01
21372--21414
16
2.6
17
75
20
54
30
2
0
67
1.03
21477--21614
66
2.2
61
84
6
168
34
22
8
34
1.85
22668--22727
25
2.4
26
80
8
70
60
5
1
33
1.29
22683--22750
25
2.5
28
83
11
79
58
8
2
29
1.43
25320--25354
18
1.9
18
88
0
52
28
17
0
54
1.43
26661--26685
13
1.9
13
100
0
50
20
24
40
16
1.91
26652--26702
18
2.7
18
87
9
66
19
23
41
15
1.90
26658--26724
31
2.2
31
91
5
109
16
20
46
16
1.84
26684--26720
13
2.8
13
83
0
56
16
21
45
16
1.84
40662--40704
21
2.0
21
82
8
52
48
2
23
25
1.62
44825--44879
27
2.0
27
100
0
110
25
14
29
30
1.95

Tables:   1

The End!