Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006919.1 Hibiscus syriacus cultivar Beakdansim tig00017735_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64530

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3016--3056
22
1.9
22
95
5
75
46
14
4
34
1.66
9836--9891
23
2.4
23
82
5
78
25
23
25
26
2.00
10007--10055
24
2.1
23
84
3
62
53
0
2
44
1.12
10638--10707
16
4.4
16
88
0
104
58
22
10
8
1.57
10896--10961
24
2.8
24
88
2
89
28
24
22
24
1.99
13551--13593
22
2.0
22
90
0
68
25
20
23
30
1.99
19989--20057
31
2.2
31
100
0
138
21
26
20
31
1.98
19989--20067
31
2.5
31
93
0
122
21
24
18
35
1.96
20525--20591
33
2.0
33
94
0
116
41
10
10
37
1.74
25540--25612
30
2.4
31
80
13
80
58
0
0
41
0.98
27324--27355
2
16.0
2
100
0
64
50
0
0
50
1.00
27804--27843
14
2.6
15
88
11
55
42
2
0
55
1.13
28022--28058
17
2.3
17
86
9
51
29
13
5
51
1.63
30191--30242
2
25.5
2
96
3
95
50
0
1
48
1.12
30450--30488
20
2.0
20
89
0
60
30
23
25
20
1.98
51849--51873
12
2.1
12
100
0
50
32
8
28
32
1.86
52290--52336
2
24.0
2
91
4
78
46
0
0
53
1.00
52805--52865
23
2.7
23
86
0
77
42
18
21
18
1.89
52798--52877
23
3.5
23
80
0
70
46
15
23
15
1.83
55342--55420
26
3.0
26
85
3
97
51
3
10
34
1.53
58086--58192
36
3.0
35
85
8
153
35
15
13
35
1.87
59608--59645
19
2.0
19
100
0
76
47
26
10
15
1.78
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64033--64057
12
2.1
12
100
0
50
40
8
0
52
1.31
64107--64144
20
1.9
20
88
0
58
34
34
13
18
1.89

Tables:   1

The End!