Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006922.1 Hibiscus syriacus cultivar Beakdansim tig00017745_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41755

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2004--2055
25
2.2
23
89
6
77
26
5
9
57
1.53
2010--2062
25
2.1
25
96
0
97
32
7
9
50
1.62
3057--3096
10
3.8
10
81
12
53
22
27
27
22
1.99
5489--5544
23
2.4
23
90
3
85
28
12
19
39
1.88
6544--6589
2
23.0
2
100
0
92
50
0
0
50
1.00
12688--12792
53
2.0
53
96
0
192
54
14
16
15
1.72
15813--15860
24
2.0
24
84
8
62
47
2
6
43
1.40
25397--25545
76
2.0
75
90
5
237
33
12
12
41
1.80
27925--27969
21
2.1
21
84
8
56
31
26
26
15
1.96
29426--29732
149
2.1
149
95
1
553
28
16
20
34
1.94
29708--29752
23
2.0
23
90
0
72
22
26
26
24
2.00
33037--33081
21
2.1
21
83
0
54
33
28
22
15
1.95
34540--34846
149
2.1
149
98
0
587
28
16
21
34
1.94
34822--34866
23
2.0
23
86
0
63
24
26
24
24
2.00

Tables:   1

The End!