Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006938.1 Hibiscus syriacus cultivar Beakdansim tig00017820_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  77682

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24--77
26
2.0
27
85
3
74
44
5
1
48
1.37
578--627
2
25.0
2
95
0
91
48
2
50
0
1.12
3224--3268
23
2.0
23
95
0
81
40
20
17
22
1.92
3308--3346
15
2.6
15
91
0
60
38
28
12
20
1.89
7027--7106
23
3.5
22
75
11
72
21
25
25
28
1.99
7019--7088
24
3.0
24
82
2
88
22
27
21
28
1.99
7096--7140
23
2.0
23
90
0
72
22
20
20
37
1.94
9665--9716
3
17.7
3
84
15
65
67
0
0
32
0.91
9659--9716
22
2.7
21
72
17
55
68
0
0
31
0.89
9964--10127
84
2.0
84
87
0
238
22
18
27
31
1.97
10167--10493
73
4.6
72
79
9
393
39
13
19
26
1.89
10167--10493
36
9.2
36
81
8
384
39
13
19
26
1.89
10390--10518
36
3.6
34
84
5
123
40
13
19
26
1.89
10576--10816
124
1.9
123
90
3
385
27
16
24
32
1.96
11336--11651
110
2.9
110
90
1
496
26
17
21
34
1.95
20594--20654
3
20.3
3
80
9
63
70
0
0
29
0.88
23229--23358
49
2.6
49
84
3
172
20
19
21
38
1.94
23227--23358
25
5.4
25
81
3
160
21
18
21
38
1.93
23764--23796
3
11.3
3
87
6
50
30
3
0
66
1.06
23744--23798
18
3.2
18
76
23
57
30
1
0
67
1.01
23752--23799
18
2.7
18
81
18
64
31
4
0
64
1.12
24325--24358
17
1.9
18
94
5
61
47
2
0
50
1.16
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25374--25434
22
2.7
23
77
10
72
47
1
0
50
1.10
26182--26216
18
1.9
18
94
0
61
54
0
2
42
1.15
32168--32289
45
2.7
45
98
0
235
45
11
15
27
1.81
32894--32955
23
2.7
23
76
0
70
37
12
8
41
1.73
36068--36101
17
2.0
17
88
11
52
64
2
14
17
1.40
36490--36518
14
2.1
14
93
6
51
48
0
6
44
1.29
36704--36850
60
2.4
60
78
7
145
38
11
8
41
1.71
37465--37493
2
14.5
2
100
0
58
48
0
0
51
1.00
46479--46543
19
3.3
19
77
12
58
41
3
1
53
1.25
47776--47843
27
2.4
29
78
7
79
33
1
4
60
1.26
55653--55717
28
2.3
28
82
7
87
16
18
30
33
1.94
57462--57561
21
4.7
21
82
6
103
22
19
35
24
1.96
57785--57823
21
1.9
21
89
5
62
48
10
7
33
1.66
60400--60491
21
4.4
21
97
0
157
17
20
42
19
1.89
60821--60971
80
1.9
80
84
2
205
29
10
10
49
1.71
65534--65671
68
2.0
68
100
0
276
18
14
32
34
1.91
67230--67277
18
2.8
16
76
17
51
18
20
22
37
1.94
72544--72570
8
3.4
8
100
0
54
22
0
0
77
0.76

Tables:   1

The End!