Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006959.1 Hibiscus syriacus cultivar Beakdansim tig00017897_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  95383

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1256--1285
14
2.1
15
93
6
53
46
6
6
40
1.56
7302--7335
16
2.1
16
88
5
50
73
0
20
5
1.04
12381--12406
5
5.2
5
100
0
52
80
0
19
0
0.71
13016--13304
95
3.0
95
90
0
443
21
18
17
41
1.90
14440--14518
39
2.0
39
100
0
158
20
12
22
44
1.85
18499--18524
11
2.4
11
100
0
52
34
0
0
65
0.93
18948--18974
11
2.5
11
100
0
54
81
0
0
18
0.69
18951--18993
16
2.6
17
85
10
63
76
0
2
20
0.89
29432--29485
20
2.8
20
84
13
62
72
0
5
22
1.05
31892--31935
17
2.5
17
81
3
52
43
2
2
52
1.26
34277--34310
16
2.1
16
100
0
68
47
5
32
14
1.69
39671--39734
20
3.4
20
66
29
59
45
18
4
31
1.70
39633--39735
35
2.9
35
89
4
143
45
17
4
32
1.69
44178--44274
48
2.0
48
100
0
194
29
26
12
30
1.93
50889--50937
24
2.0
24
92
0
80
40
10
38
10
1.73
52451--52476
11
2.4
11
100
0
52
34
11
0
53
1.37
60202--60264
21
2.9
21
80
4
63
22
33
25
19
1.97
60246--60285
21
1.9
21
84
0
53
25
37
25
12
1.91
67075--67100
11
2.4
11
100
0
52
34
11
0
53
1.37
67131--67168
20
2.0
20
85
10
53
44
23
0
31
1.54
71228--71309
21
3.8
21
75
10
67
14
24
37
23
1.92
71251--71311
20
2.9
21
82
7
70
14
26
36
22
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
81004--81051
24
2.0
24
95
0
87
39
8
43
8
1.65
83725--83773
24
2.0
24
96
0
89
28
14
20
36
1.92
84008--84046
5
7.8
5
91
0
51
2
41
33
23
1.68
84044--84140
6
16.2
6
97
0
176
2
16
49
31
1.57
84418--84472
22
2.5
22
75
0
56
29
9
23
38
1.85
88107--88145
5
7.8
5
91
0
51
2
41
33
23
1.68
88143--88227
6
14.2
6
97
0
152
2
16
49
31
1.58
88505--88559
22
2.5
22
75
0
56
29
9
23
38
1.85
91722--92058
167
2.0
166
96
3
624
39
13
18
28
1.88
93056--93109
2
27.0
2
100
0
108
50
0
0
50
1.00
93718--93754
11
3.2
12
81
11
51
59
0
0
40
0.97

Tables:   1

The End!