Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006962.1 Hibiscus syriacus cultivar Beakdansim tig00017910_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  87999

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11372--11438
32
2.1
32
100
0
134
47
11
25
14
1.79
11415--11458
21
2.3
19
84
11
54
43
11
20
25
1.85
20574--20647
34
2.2
34
97
0
139
35
20
13
31
1.91
24680--24744
31
2.1
31
91
0
103
38
10
15
35
1.82
30588--31688
106
10.5
106
92
1
1713
23
18
25
32
1.97
30588--31687
317
3.5
314
92
2
1764
23
18
25
32
1.97
42389--43089
351
2.0
351
100
0
1402
24
19
19
37
1.94
44462--44492
15
2.1
15
93
0
53
61
3
0
35
1.12
45108--45186
40
2.0
41
92
2
133
46
7
8
36
1.64
49706--49734
15
1.9
15
100
0
58
6
20
6
65
1.40
57505--57564
31
1.9
31
93
0
102
41
5
8
45
1.56
58020--58081
18
3.2
20
78
19
62
61
0
1
37
1.06
58046--58178
63
2.1
59
76
21
135
55
1
1
41
1.18
58076--58235
64
2.6
64
88
8
242
55
2
0
41
1.18
58098--58180
40
2.2
37
87
10
114
55
1
0
43
1.07
58131--58204
24
3.0
25
83
13
82
52
2
0
44
1.15
58199--58241
17
2.4
18
88
7
61
62
2
0
34
1.08
60476--60531
10
5.4
10
72
16
51
8
12
21
57
1.62
60482--60538
16
3.7
16
88
4
82
10
12
19
57
1.63
64440--64784
190
1.8
190
87
3
525
45
9
4
40
1.57
65710--65758
19
2.3
23
74
25
54
55
4
4
36
1.38
67358--67406
16
3.0
16
84
3
53
44
18
12
24
1.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
70716--70759
19
2.2
21
92
8
74
59
0
0
40
0.98
70726--70765
19
2.2
19
86
4
55
60
0
0
40
0.97
70493--70819
166
1.9
169
85
4
446
46
11
3
38
1.58
71884--71923
21
1.9
22
90
10
66
12
10
40
37
1.77
72387--72426
21
1.9
21
89
0
62
50
10
10
30
1.69
75057--75126
34
2.1
32
89
5
104
24
28
14
32
1.94
75342--75381
21
1.9
22
85
10
57
15
10
40
35
1.80
75543--75645
21
4.9
21
77
11
111
22
18
36
22
1.95
76014--76985
247
4.2
223
77
14
812
40
17
11
30
1.85
76883--76955
31
2.4
31
79
4
76
39
32
12
15
1.84
80910--80976
35
1.9
35
87
0
98
34
8
8
47
1.66

Tables:   1

The End!