Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006965.1 Hibiscus syriacus cultivar Beakdansim tig00017926_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75815

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3651--3687
19
1.9
19
88
0
56
48
2
8
40
1.47
7044--7087
2
22.5
2
86
4
63
43
0
4
52
1.22
14346--14522
97
1.9
94
83
3
228
36
24
8
30
1.85
15375--15402
14
2.0
14
100
0
56
42
0
7
50
1.30
19774--19823
20
2.5
20
86
0
64
44
20
16
20
1.87
19974--20036
20
2.9
23
77
15
71
22
14
26
36
1.92
20291--20341
20
2.5
20
87
0
66
27
23
13
35
1.93
20464--20512
20
2.5
20
79
0
62
20
20
20
38
1.93
20387--20815
154
2.9
146
80
8
556
25
15
21
36
1.94
20576--20628
14
3.8
14
92
0
88
26
13
24
35
1.92
20765--20825
20
3.0
20
79
9
70
24
14
16
44
1.85
20760--20855
40
2.4
40
87
3
131
25
14
16
43
1.86
20774--20834
20
3.1
20
77
11
63
27
14
13
44
1.83
20827--20895
20
3.5
19
82
9
66
17
15
21
44
1.86
20844--20897
20
2.7
20
88
0
81
12
14
27
44
1.82
22048--22128
40
2.0
40
100
0
162
32
14
14
38
1.87
24029--24095
23
2.9
23
84
4
91
28
25
23
22
1.99
24111--24326
103
2.1
103
96
0
396
36
24
13
25
1.92
25064--25220
64
2.5
64
82
6
167
27
19
20
33
1.96
26160--26201
15
2.9
15
79
10
52
66
2
0
30
1.04
26172--26262
36
2.6
35
69
19
89
60
2
1
36
1.16
31434--31555
51
2.4
52
82
4
142
16
33
30
19
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31716--31744
14
2.1
14
93
6
51
27
6
0
65
1.18
36690--36812
49
2.5
51
93
2
205
27
22
23
26
2.00
45973--46110
60
2.3
60
78
5
136
34
15
17
32
1.91
46447--46502
26
2.1
27
93
3
96
50
19
10
19
1.77
46774--46883
55
2.0
55
96
0
202
29
13
17
40
1.88
65476--65747
90
3.0
90
92
3
449
37
15
6
40
1.73
66748--66862
58
2.0
60
85
3
162
45
11
4
39
1.60
71696--71720
10
2.5
10
100
0
50
88
0
12
0
0.53
72796--73069
148
1.9
145
82
9
319
38
6
7
47
1.58

Tables:   1

The End!