Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006971.1 Hibiscus syriacus cultivar Beakdansim tig00017956_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59065

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5204--5253
21
2.4
21
80
16
59
46
24
0
30
1.53
5274--5327
24
2.3
24
87
3
74
38
5
11
44
1.63
6456--6505
3
16.7
3
100
0
100
34
0
0
66
0.92
9141--9250
53
2.1
53
98
0
211
31
22
13
31
1.93
11441--11609
64
2.7
63
86
8
218
34
18
18
27
1.95
12135--12187
21
2.6
21
76
8
56
26
11
20
41
1.86
12055--12278
102
2.2
100
93
3
367
25
12
25
36
1.92
12287--12349
23
2.7
23
87
4
92
22
22
26
28
1.99
18739--18955
102
2.1
103
96
0
400
25
13
24
36
1.92
18980--19034
23
2.4
23
93
0
92
21
23
27
27
1.99
21905--21937
15
2.1
16
88
5
50
54
15
3
27
1.55
27744--27821
31
2.5
31
77
10
88
23
16
26
33
1.96
28589--28628
16
2.5
16
87
0
53
10
5
27
57
1.52
29346--29376
2
15.5
2
100
0
62
51
0
0
48
1.00
38972--39035
32
2.0
31
96
3
119
45
12
7
34
1.71
48170--48232
17
3.4
19
76
10
67
12
9
20
57
1.63

Tables:   1

The End!