Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006975.1 Hibiscus syriacus cultivar Beakdansim tig00017961_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73342

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5154--5243
30
3.0
30
98
0
171
16
31
10
42
1.81
14309--14420
24
4.7
24
85
7
129
26
12
19
41
1.87
14306--14430
24
5.2
25
83
7
100
26
12
19
42
1.86
22719--22772
20
2.8
18
76
13
54
51
1
0
46
1.11
27294--27336
21
2.0
21
81
0
50
30
30
25
13
1.94
27316--27466
66
2.3
67
90
4
234
29
28
27
14
1.95
28070--28128
22
2.6
23
94
2
102
18
27
30
23
1.98
30910--30954
21
2.1
21
87
0
63
31
28
24
15
1.96
31551--31597
23
2.0
24
91
4
78
44
0
21
34
1.52
31775--31930
31
5.0
31
88
1
224
21
20
21
36
1.95
31777--31930
62
2.5
62
91
4
249
21
20
21
36
1.95
32629--32690
31
2.0
31
100
0
124
22
9
35
32
1.87
34786--34830
21
2.1
21
87
0
63
31
28
24
15
1.96
35429--35475
23
2.0
24
91
4
78
44
0
21
34
1.52
35653--35808
31
5.0
31
88
1
224
21
20
21
36
1.95
35655--35808
62
2.5
62
91
4
249
21
20
21
36
1.95
40448--40490
21
2.0
21
81
0
50
30
30
25
13
1.94
40470--40618
66
2.3
67
89
5
232
29
28
27
14
1.95
41222--41280
22
2.6
23
94
2
102
18
27
30
23
1.98
43547--43591
23
1.9
24
90
4
74
42
20
15
22
1.89
44790--44825
16
2.1
19
85
15
51
47
0
5
47
1.25
49868--49906
17
2.2
17
86
4
51
35
10
25
28
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50252--50980
259
2.9
256
87
7
1016
41
18
11
28
1.86
56031--56072
20
2.1
20
100
0
84
19
23
11
45
1.83
56035--56079
20
2.3
20
92
3
74
24
24
6
44
1.77
56043--56086
19
2.2
20
84
4
54
25
29
6
38
1.81

Tables:   1

The End!