Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006976.1 Hibiscus syriacus cultivar Beakdansim tig00017964_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63238

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2708--2898
64
3.0
64
77
13
178
30
22
18
28
1.97
11438--11544
45
2.4
45
84
4
126
29
20
19
29
1.97
11514--11562
19
2.6
19
84
9
57
24
28
20
26
1.99
13062--13097
18
2.0
18
94
0
63
16
22
30
30
1.96
17535--17569
17
2.1
17
88
0
52
42
11
14
31
1.81
20562--20660
29
3.3
29
72
13
76
37
19
2
41
1.63
20552--20694
60
2.4
59
80
6
146
34
19
4
41
1.73
25608--25702
2
47.5
2
100
0
190
49
0
0
50
1.00
30004--30063
19
3.5
19
70
25
60
20
16
35
28
1.94
29997--30063
32
2.1
32
97
0
125
19
19
32
28
1.96
33066--33092
2
13.5
2
100
0
54
51
0
0
48
1.00
34805--34869
31
2.1
31
94
0
112
32
32
13
21
1.93
36895--36934
8
5.0
8
84
9
55
65
2
0
32
1.06
40479--40509
3
10.7
3
93
6
55
32
0
0
67
0.91
48602--48626
5
5.0
5
100
0
50
20
0
20
60
1.37
50078--50241
79
2.1
79
84
2
213
30
21
19
28
1.97
50246--50784
111
4.9
111
91
0
801
31
23
16
28
1.96
50992--51026
3
11.7
3
88
11
54
34
0
0
65
0.93
50988--51029
13
3.5
13
87
12
63
35
0
0
64
0.94
58567--58661
33
2.8
36
87
12
146
44
13
13
28
1.82
59051--59085
15
2.3
15
90
0
52
22
5
2
68
1.24
59130--59201
22
3.3
22
70
16
53
34
5
1
58
1.30

Tables:   1

The End!