Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006978.1 Hibiscus syriacus cultivar Beakdansim tig00017970_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  87375

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1398--1478
32
2.5
32
81
0
99
19
25
23
30
1.98
1726--2007
71
4.1
71
73
12
221
41
9
20
29
1.84
1763--2007
134
1.8
131
86
4
348
42
8
19
28
1.82
7115--7192
21
3.7
21
75
10
68
30
15
25
28
1.96
7159--7198
21
2.0
21
85
5
55
25
15
32
27
1.95
8109--8179
32
2.3
31
87
4
99
26
21
21
30
1.98
15712--15764
21
2.5
22
84
9
65
30
15
26
28
1.96
16509--16579
30
2.3
31
85
4
90
30
18
19
30
1.96
27345--27486
47
3.3
45
83
11
181
31
21
7
40
1.80
30086--30348
119
2.2
119
89
1
393
34
16
16
31
1.92
31989--32069
28
2.9
27
89
7
117
38
25
19
16
1.92
33474--33520
13
3.7
13
94
2
78
19
46
21
12
1.82
33452--33532
17
5.2
16
82
11
66
19
43
22
14
1.88
33521--33561
7
5.9
7
94
0
73
14
29
26
29
1.95
40723--40803
17
5.2
17
85
11
79
18
44
23
13
1.85
40745--40793
13
3.8
13
97
2
91
16
46
24
12
1.81
40793--40832
7
5.7
7
93
0
71
17
27
30
25
1.97
62609--62798
75
2.6
73
84
7
233
30
1
12
55
1.47
63444--63485
18
2.4
18
80
4
50
28
4
0
66
1.12
69003--69055
27
2.0
27
85
7
72
15
9
0
75
1.04
69063--69110
5
9.6
5
77
8
53
22
4
0
72
1.01
70878--71067
76
2.6
74
87
9
257
30
0
14
55
1.43
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
71712--71756
18
2.5
17
86
10
63
28
4
0
66
1.11
72866--72896
9
3.3
9
91
8
53
80
0
9
9
0.90
72866--72896
10
3.2
10
95
4
55
80
0
9
9
0.90
74234--74279
22
2.1
21
84
4
56
41
8
2
47
1.46

Tables:   1

The End!