Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006980.1 Hibiscus syriacus cultivar Beakdansim tig00017981_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  99316

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3017--3067
20
2.5
21
81
12
54
29
1
27
41
1.67
9124--9169
20
2.3
19
85
14
58
26
15
8
50
1.73
25106--25140
18
2.0
18
88
5
54
71
8
0
20
1.11
31922--31970
19
2.7
17
84
9
53
26
18
30
24
1.98
31942--32151
64
3.2
64
80
7
194
26
15
25
32
1.95
32112--32151
21
1.9
21
94
0
71
22
15
30
32
1.94
33152--33195
21
2.1
21
82
0
52
36
15
40
6
1.74
38915--38963
19
2.7
17
84
9
53
26
18
30
24
1.98
38935--39137
64
3.1
64
81
7
207
27
15
25
31
1.96
39045--39091
19
2.5
19
83
10
62
25
17
31
25
1.97
44074--44132
28
2.1
29
87
9
86
20
13
3
62
1.45
56545--56595
20
2.5
21
81
12
54
29
0
27
43
1.55
65765--65810
20
2.3
19
85
14
58
26
15
8
50
1.73
71375--71399
12
2.1
12
100
0
50
76
16
0
8
1.02
82961--83030
34
2.0
35
86
5
97
10
20
4
65
1.39

Tables:   1

The End!