Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006983.1 Hibiscus syriacus cultivar Beakdansim tig00017992_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72011

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6847--6887
21
2.0
21
90
0
64
17
24
19
39
1.92
9215--9269
23
2.3
24
75
6
58
25
25
7
41
1.81
10247--10304
21
2.8
20
71
5
53
34
25
17
22
1.96
10247--10334
42
2.1
42
83
6
108
35
23
17
23
1.95
9777--10713
255
3.7
258
87
2
1282
35
16
14
32
1.90
19916--19986
24
2.9
24
75
8
72
22
22
11
43
1.85
20325--20372
3
16.0
3
91
8
80
64
0
0
35
0.94
24381--24799
191
2.2
192
84
4
533
38
12
11
37
1.79
38386--38468
3
27.7
3
97
0
157
65
0
1
33
1.01
38766--40108
113
11.9
113
97
0
2261
29
18
13
37
1.89
40905--43413
83
30.2
83
97
0
4725
35
21
14
29
1.92
44550--44633
1
84.0
1
71
0
51
0
15
0
84
0.62
44551--44645
9
10.8
9
77
13
90
0
16
0
83
0.65
44549--44645
24
4.1
24
84
10
137
0
17
0
82
0.67
44556--44645
14
6.8
13
77
16
87
0
17
0
82
0.68
44552--44645
32
2.7
36
82
16
133
0
17
0
82
0.66
44549--44642
19
5.3
19
73
19
103
0
17
0
82
0.66
57386--57419
18
1.9
17
88
5
50
41
0
5
52
1.25
57410--57469
3
19.7
3
89
3
93
61
0
1
36
1.06
64696--64721
13
2.0
13
100
0
52
15
23
15
46
1.83
64861--64952
26
3.6
25
82
10
107
5
14
1
79
0.96
64865--64951
6
13.7
6
75
22
63
4
13
1
80
0.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64861--64930
25
2.7
25
86
6
86
5
14
1
78
1.00
64865--64952
15
6.1
15
71
16
62
4
13
1
80
0.92
64875--64951
19
3.9
19
79
17
77
3
14
1
80
0.92
65619--65665
18
2.5
19
82
6
51
6
10
2
80
0.96
65638--65709
14
5.0
14
69
21
51
4
18
0
77
0.92
65637--65709
27
2.8
26
78
19
80
4
17
0
78
0.91

Tables:   1

The End!