Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006987.1 Hibiscus syriacus cultivar Beakdansim tig00018016_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75606

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4161--4212
24
2.1
25
89
10
81
36
5
3
53
1.43
4750--4787
19
2.0
19
94
0
67
47
13
5
34
1.65
7571--7881
6
51.3
6
95
1
496
33
3
16
46
1.65
17645--17674
2
15.0
2
100
0
60
50
0
0
50
1.00
20727--20764
18
2.1
19
90
5
60
34
2
10
52
1.50
28042--28068
4
6.8
4
100
0
54
25
0
22
51
1.48
28202--28232
4
7.8
4
100
0
62
51
22
0
25
1.48
27907--28245
181
1.9
180
94
0
597
36
16
10
36
1.82
31706--31773
23
3.0
23
77
20
79
13
22
13
51
1.75
32892--32934
21
2.1
20
82
4
50
23
11
9
55
1.64
35147--35181
16
2.1
18
89
10
56
65
0
8
25
1.21
35745--35844
35
2.8
36
84
6
121
32
15
15
38
1.88
37260--37310
16
3.2
16
72
13
52
50
0
5
43
1.26
40340--40373
16
2.1
16
88
0
50
50
0
2
47
1.16
40414--40447
16
2.0
18
88
11
54
26
2
5
64
1.30
40912--41165
124
2.0
123
87
7
361
37
12
14
35
1.84
41550--41625
35
2.2
35
92
0
125
35
1
23
39
1.63
45294--45330
19
1.9
20
94
5
67
59
0
0
40
0.97
58979--59079
29
3.2
31
78
13
82
49
2
12
34
1.56
61519--61561
8
4.9
8
79
20
50
51
11
0
37
1.39
62028--62056
14
2.1
14
100
0
58
34
13
0
51
1.42
63458--63516
23
2.6
23
91
0
100
22
18
8
50
1.73
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63997--64043
24
2.0
24
95
4
87
48
4
8
38
1.53
64001--64060
24
2.5
24
84
10
70
51
5
10
33
1.57

Tables:   1

The End!