Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006989.1 Hibiscus syriacus cultivar Beakdansim tig00018026_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51642

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1115--1162
22
2.1
23
96
3
89
27
12
16
43
1.84
1758--1788
2
16.0
2
93
6
55
51
0
0
48
1.00
2911--2955
18
2.4
19
81
7
56
66
8
0
24
1.20
3122--3166
19
2.4
19
80
0
54
64
4
0
31
1.13
5444--5530
31
2.9
30
87
3
120
63
6
6
22
1.44
6322--6392
32
2.2
34
76
20
82
52
0
0
47
1.00
6393--6423
12
2.6
12
94
0
53
19
45
22
12
1.84
8808--8845
19
2.0
19
85
10
51
47
7
0
44
1.32
20318--20367
26
2.0
26
84
4
66
46
10
24
20
1.81
22393--22564
75
2.3
75
82
4
204
31
5
11
50
1.62
33016--33058
11
3.8
12
78
12
54
2
13
9
74
1.16
33009--33068
22
2.7
22
81
0
75
1
10
10
78
1.04
41686--41744
24
2.5
24
88
0
91
42
10
15
32
1.80
45593--45622
2
15.5
2
93
6
53
53
0
0
46
1.00
45669--45714
2
23.5
2
95
4
85
50
0
0
50
1.00
45701--45903
37
5.5
35
75
16
171
45
4
5
44
1.48
45773--45824
2
26.5
2
96
3
97
51
0
0
48
1.00
45669--45898
110
2.1
112
91
4
378
46
4
4
44
1.44
45980--46018
4
10.0
4
84
15
55
23
2
0
74
0.94
45997--46037
11
3.9
11
78
9
50
24
4
0
70
1.06

Tables:   1

The End!