Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000699.1 Hibiscus syriacus cultivar Beakdansim tig00001361_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49495

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11904--11951
23
2.1
23
88
7
71
37
8
4
50
1.52
12689--12772
37
2.5
31
75
20
87
50
3
0
46
1.19
17011--17055
3
14.3
3
90
9
72
35
0
0
64
0.94
17012--17095
12
6.4
14
75
19
67
39
2
0
58
1.11
18065--18106
22
2.0
22
82
13
54
26
16
9
47
1.77
25848--25926
13
6.3
13
71
17
53
37
3
0
58
1.16
25848--25925
18
4.5
17
75
22
74
38
3
0
57
1.17
25882--25922
5
8.4
5
79
15
50
41
0
0
58
0.98
30076--30105
2
15.0
2
100
0
60
50
0
0
50
1.00
32250--32324
38
2.0
38
89
0
114
32
22
10
34
1.89
36226--36262
20
1.9
19
89
10
58
45
10
24
18
1.81
37731--37827
42
2.2
42
83
8
115
44
4
10
41
1.57
38023--38111
31
3.0
31
67
20
91
41
3
8
46
1.52
37985--38167
58
3.2
58
84
6
194
36
3
10
49
1.56
38128--38318
39
5.0
39
82
11
211
39
3
9
47
1.54
38128--38318
77
2.5
75
79
7
199
39
3
9
47
1.54
40096--40133
19
2.0
20
84
5
51
36
0
23
39
1.55
47191--47233
17
2.3
19
84
11
54
34
13
23
27
1.93
47886--47937
18
2.9
18
94
2
88
17
21
32
28
1.96

Tables:   1

The End!