Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006991.1 Hibiscus syriacus cultivar Beakdansim tig00018028_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38180

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
635--662
14
2.0
14
100
0
56
28
0
21
50
1.49
12490--12589
35
2.7
35
86
6
119
38
15
16
31
1.89
16497--16539
13
3.2
13
81
18
52
79
9
11
0
0.95
16497--16539
14
3.2
13
83
9
50
79
9
11
0
0.95
16521--16576
16
3.6
15
79
18
53
76
8
14
0
1.00
16510--16574
23
2.8
24
86
6
80
76
7
15
0
0.99
17160--17203
22
2.0
22
91
8
72
38
22
11
27
1.88
17638--17673
18
2.0
18
94
0
63
16
8
33
41
1.78
18154--18535
36
10.9
36
75
13
282
27
20
12
39
1.89
18238--18401
37
4.5
36
88
4
231
27
20
11
40
1.87
18154--18535
174
2.2
174
84
1
498
27
20
12
39
1.89
18282--18535
138
1.8
137
87
2
375
27
19
13
40
1.89
19208--20179
105
9.3
105
84
5
1089
33
24
19
22
1.97
20639--20738
35
2.7
35
84
6
110
37
16
16
31
1.90
21106--21148
18
2.5
17
85
7
61
25
4
2
67
1.22
21681--21714
9
3.8
9
92
7
52
20
2
0
76
0.92
21681--21715
13
2.6
14
90
4
54
20
2
0
77
0.90
25532--25573
17
2.5
17
84
0
57
35
14
4
45
1.66
30097--30263
90
1.9
90
91
5
275
38
11
4
44
1.63
35092--35269
90
2.0
90
92
0
293
37
10
7
45
1.66

Tables:   1

The End!