Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006992.1 Hibiscus syriacus cultivar Beakdansim tig00018030_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58118

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--418
175
2.4
177
89
4
632
41
14
16
26
1.88
3471--3609
60
2.3
59
81
7
154
33
23
4
38
1.74
4658--4683
13
2.0
13
100
0
52
53
7
0
38
1.30
7256--7301
19
2.4
19
100
0
92
30
32
17
19
1.95
13066--13168
44
2.4
44
91
1
163
31
22
18
28
1.97
15705--15750
19
2.4
19
100
0
92
30
32
17
19
1.95
18033--18072
20
2.0
20
100
0
80
15
40
10
35
1.80
18379--18442
33
1.9
33
93
0
110
23
6
20
50
1.71
25546--25593
20
2.3
21
79
13
55
43
12
16
27
1.84
30503--30611
36
3.1
36
86
1
139
40
17
22
19
1.91
31527--31553
2
13.5
2
100
0
54
48
0
0
51
1.00
44993--45270
112
2.5
111
91
0
439
44
14
15
25
1.84
45141--45592
181
2.5
182
91
2
721
43
12
15
28
1.83
47892--47920
13
2.3
13
94
5
51
24
0
0
75
0.80
47967--48008
2
21.0
2
90
0
66
50
0
0
50
1.00

Tables:   1

The End!