Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006993.1 Hibiscus syriacus cultivar Beakdansim tig00018031_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53135

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
272--313
15
2.8
15
82
13
59
59
4
0
35
1.19
275--313
14
2.6
16
80
12
55
61
5
0
33
1.18
553--602
16
3.1
16
94
2
82
38
0
10
52
1.35
12164--12280
39
3.0
39
96
0
207
17
18
19
44
1.87
19305--19336
2
16.0
2
100
0
64
50
0
0
50
1.00
19808--19858
2
25.5
2
100
0
102
50
0
0
49
1.00
23883--23946
23
2.8
23
100
0
128
37
7
20
34
1.81
30573--30640
23
3.0
23
80
0
82
44
13
10
32
1.77
33001--33062
20
3.1
20
80
0
79
25
6
40
27
1.80
33034--33077
22
2.0
23
86
4
63
25
6
40
27
1.80
33634--33689
30
1.9
29
85
7
78
26
3
0
69
1.04
33648--33689
12
3.5
12
78
12
50
21
2
0
76
0.90
33637--33693
28
2.0
27
87
12
80
22
3
0
73
0.98
33722--33758
11
3.3
11
92
3
56
21
2
0
75
0.92
33856--33882
12
2.2
12
100
0
54
37
7
0
55
1.28
34004--34045
15
2.6
16
81
7
50
30
4
4
59
1.39
38002--38589
130
4.5
129
82
5
610
31
17
19
31
1.95
38002--38589
262
2.2
262
84
3
727
31
17
19
31
1.95
52118--52180
23
2.7
23
80
0
72
19
25
25
30
1.98
52991--53016
13
2.0
13
100
0
52
30
23
7
38
1.83

Tables:   1

The End!