Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006995.1 Hibiscus syriacus cultivar Beakdansim tig00018039_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  83566

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1667--1747
13
6.9
11
73
24
60
32
34
3
29
1.75
1663--1767
35
3.0
36
91
2
160
31
35
4
28
1.78
4134--4160
2
13.5
2
100
0
54
51
0
0
48
1.00
7197--7243
14
3.1
15
75
12
51
72
6
19
2
1.17
37346--37431
38
2.3
38
100
0
172
25
38
0
36
1.56
42759--42826
33
2.1
33
83
5
84
30
1
36
30
1.67
47204--47271
33
2.1
33
83
5
84
30
1
36
30
1.67
51650--51717
33
2.1
33
83
5
84
30
1
36
30
1.67
63382--63427
20
2.3
20
85
10
60
39
0
23
36
1.55
67669--67763
42
2.2
42
79
1
109
29
17
17
34
1.94
67818--67899
43
1.9
43
85
5
112
31
25
13
29
1.94
70914--71211
141
2.1
139
83
4
359
41
13
16
29
1.85
73210--73323
53
2.2
53
91
0
192
50
10
12
26
1.72
73803--73840
20
1.9
20
88
0
58
60
0
2
36
1.11
78104--78150
22
2.1
23
84
11
62
44
4
0
51
1.21
78140--78193
23
2.3
23
84
6
65
55
1
1
40
1.21
78454--78507
24
2.2
25
83
6
65
51
0
0
48
1.00
78628--78662
14
2.5
14
90
0
52
40
5
14
40
1.69

Tables:   1

The End!