Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006996.1 Hibiscus syriacus cultivar Beakdansim tig00018040_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  95647

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2402--2440
18
2.2
18
90
0
60
41
2
0
56
1.13
13487--13593
49
2.2
48
72
1
106
24
7
15
52
1.69
16289--16331
2
22.0
2
95
4
79
51
0
0
48
1.00
18168--18244
35
2.2
35
85
0
100
42
27
2
27
1.68
20168--20264
35
2.8
34
85
3
104
29
2
24
43
1.66
20185--20264
35
2.3
36
89
4
119
32
1
21
45
1.60
22289--22325
20
1.9
20
94
5
67
56
2
0
40
1.13
22515--22614
13
7.7
13
66
0
65
41
21
15
23
1.90
22524--22685
39
4.2
39
95
0
270
37
19
19
24
1.94
22515--22630
26
4.5
26
67
0
70
40
20
16
22
1.91
28693--28743
22
2.3
22
96
0
93
15
25
43
15
1.86
46165--46208
13
3.2
13
78
15
52
79
2
4
13
0.98
49577--49616
20
2.0
21
85
5
55
60
7
0
32
1.25
62560--62608
23
2.1
23
96
0
89
55
8
10
26
1.61
74061--74125
19
3.5
19
68
10
53
58
20
7
13
1.60
74057--74127
36
1.9
37
88
2
108
57
19
7
15
1.61
83251--83314
32
2.0
31
96
3
119
34
7
12
45
1.71
84093--84138
22
2.1
22
92
4
76
50
4
0
45
1.21
92787--92815
2
14.5
2
100
0
58
48
0
0
51
1.00
93520--93559
16
2.5
16
87
0
53
57
27
5
10
1.52
94314--94389
31
2.4
31
78
10
84
32
27
15
23
1.95

Tables:   1

The End!