Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006997.1 Hibiscus syriacus cultivar Beakdansim tig00018043_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61774

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9815--9883
21
3.2
20
75
13
59
27
1
1
69
1.05
12837--12878
21
2.0
21
86
9
59
28
14
0
57
1.38
19135--19185
15
3.4
15
68
10
50
49
9
15
25
1.75
21698--22047
177
2.0
177
87
1
504
25
13
19
41
1.88
24762--25157
79
5.1
79
90
1
568
37
10
22
29
1.87
29106--29168
30
2.1
30
100
0
126
36
7
22
33
1.83
29840--29870
15
2.1
15
100
0
62
32
19
32
16
1.94
37858--38099
79
3.1
79
93
0
394
36
10
24
28
1.89
39220--39347
62
2.1
62
90
0
202
30
21
17
29
1.97
41246--41700
59
7.8
58
85
2
583
34
18
10
36
1.86
42033--42084
22
2.5
20
84
6
59
28
25
15
30
1.96
42031--42255
95
2.4
95
83
3
265
28
23
15
32
1.95
43528--43574
2
23.5
2
100
0
94
51
0
0
48
1.00
50054--50111
27
2.2
26
90
6
98
43
24
6
25
1.79
52602--52674
29
2.5
29
73
8
69
30
17
9
42
1.81
56748--56796
15
3.5
15
74
25
61
59
2
10
28
1.41
56752--56797
14
3.4
14
72
27
53
58
2
10
28
1.43
56746--56797
27
1.9
27
100
0
104
55
3
9
30
1.50

Tables:   1

The End!