Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006998.1 Hibiscus syriacus cultivar Beakdansim tig00018051_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50326

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9977--10059
43
1.9
43
82
4
105
25
20
19
34
1.96
32573--32602
15
2.0
15
93
0
51
13
0
30
56
1.37
36778--36816
19
2.2
17
90
9
60
17
25
38
17
1.92
45617--45658
12
3.5
12
75
12
50
35
7
28
28
1.84
45618--45670
24
2.2
24
96
0
97
35
7
26
30
1.84
45629--45672
12
3.7
12
76
11
54
36
6
25
31
1.82
45822--45860
2
21.0
2
85
15
57
51
0
0
48
1.00
46041--46070
14
2.1
14
100
0
60
53
0
6
40
1.27
46741--46813
31
2.4
31
88
0
101
31
13
27
27
1.94
46795--46868
31
2.4
31
83
0
85
33
20
16
29
1.94

Tables:   1

The End!