Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007002.1 Hibiscus syriacus cultivar Beakdansim tig00018070_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55095

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4651--4702
4
13.5
4
86
8
63
30
1
19
48
1.60
8866--8921
2
30.0
2
75
13
57
48
0
0
51
1.00
15253--15290
18
2.1
19
85
5
51
60
0
2
36
1.11
16083--16133
2
25.5
2
95
0
93
49
1
0
49
1.12
16092--16149
16
3.9
14
91
6
55
53
0
0
46
1.00
17483--17512
16
1.9
15
93
6
51
83
0
0
16
0.65
18028--18716
105
6.7
105
96
1
1096
22
18
26
33
1.96
28966--28999
10
3.4
10
87
0
50
73
0
5
20
1.04
30159--30191
2
16.5
2
93
0
57
48
3
0
48
1.17
31538--31567
16
1.9
15
93
6
51
83
0
0
16
0.65
33224--33260
6
6.2
6
96
0
65
35
0
29
35
1.58
33217--33260
18
2.4
18
88
0
70
36
0
27
36
1.57
37931--37976
2
23.0
2
100
0
92
50
0
0
50
1.00
44618--44683
30
2.2
30
83
2
80
50
3
10
36
1.53
54236--54269
14
2.4
14
90
0
50
35
14
17
32
1.91
54530--54579
22
2.2
23
82
3
57
46
0
2
52
1.12
54638--54696
18
3.0
21
70
14
61
61
1
0
37
1.07
54989--55013
13
1.9
13
100
0
50
48
4
8
40
1.51

Tables:   1

The End!