Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007006.1 Hibiscus syriacus cultivar Beakdansim tig00018083_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30501

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
615--1251
180
3.6
179
92
5
1082
33
16
14
35
1.89
2711--2797
3
29.0
3
77
0
84
24
34
5
35
1.79
2711--2812
18
5.7
18
79
0
87
22
34
6
36
1.81
2719--2809
42
2.2
42
91
0
146
21
35
7
35
1.83
4374--5617
195
6.4
197
93
4
2095
31
15
15
37
1.89
4248--5617
391
3.6
393
92
5
2237
31
15
15
37
1.89
5698--5738
19
2.2
19
86
4
57
58
9
2
29
1.43
9843--9889
20
2.4
19
79
10
58
19
17
8
55
1.67
10010--10055
20
2.3
20
89
10
76
17
17
10
54
1.70
10121--10568
228
2.0
227
93
3
776
39
7
8
44
1.62
17531--17590
3
19.7
3
83
10
77
61
1
1
35
1.16
18517--18567
22
2.4
22
83
3
68
39
9
0
50
1.35
18517--18565
21
2.3
21
85
3
62
38
10
0
51
1.36
19117--19186
33
2.1
33
83
0
86
21
31
14
32
1.93
19877--19934
19
3.0
20
90
9
93
44
12
13
29
1.80

Tables:   1

The End!