Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007019.1 Hibiscus syriacus cultivar Beakdansim tig00018132_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36429

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4450--4505
29
2.0
28
86
10
78
64
3
0
32
1.11
4675--4722
22
2.0
25
84
11
66
62
2
2
33
1.18
5507--5550
21
2.1
21
95
0
79
22
20
25
31
1.98
6286--6426
31
4.5
31
90
0
201
40
20
17
21
1.91
8032--8060
6
4.8
6
100
0
58
17
34
0
48
1.47
8250--8284
2
17.5
2
100
0
70
48
0
0
51
1.00
22746--22784
20
1.9
20
84
5
51
48
17
2
30
1.61
25882--25999
42
2.8
41
89
3
166
52
18
3
25
1.61
27185--27241
19
2.9
19
75
17
55
3
47
0
49
1.18
30848--30900
18
2.9
18
94
0
97
26
32
22
18
1.97

Tables:   1

The End!