Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007023.1 Hibiscus syriacus cultivar Beakdansim tig00018159_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  97834

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
938--1008
35
2.0
35
100
0
142
45
5
8
40
1.58
7283--7337
25
2.2
26
90
3
85
49
5
21
23
1.70
13412--13469
21
2.7
21
83
2
62
50
0
1
48
1.11
13508--13574
21
3.2
21
91
0
98
52
1
1
44
1.19
13508--13574
11
6.4
11
83
8
86
52
1
1
44
1.19
14225--14293
20
3.4
20
76
13
70
31
13
21
33
1.92
16110--16224
60
1.9
60
85
0
158
40
16
13
30
1.86
28403--28532
40
3.4
38
83
13
167
33
23
24
19
1.97
43644--43691
24
2.0
24
95
0
87
47
0
2
50
1.12
62439--62498
31
1.9
31
89
0
93
38
6
11
43
1.68
63007--63053
14
3.7
14
68
26
50
57
0
0
42
0.98
63002--63049
23
2.3
21
80
19
64
56
0
0
43
0.99
63012--63057
23
2.0
23
95
0
83
54
0
0
45
0.99
62995--63115
61
2.0
62
93
4
210
54
2
0
42
1.13
80616--80652
17
2.2
17
95
0
65
8
5
51
35
1.55

Tables:   1

The End!