Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007025.1 Hibiscus syriacus cultivar Beakdansim tig00018181_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  76408

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8796--9075
138
2.0
138
85
0
380
32
7
20
39
1.81
11169--11213
24
1.9
23
82
13
56
51
4
15
28
1.63
12477--12546
21
3.3
20
74
7
68
54
7
12
25
1.63
13016--13066
26
2.0
26
88
0
75
33
7
1
56
1.39
18145--18180
14
2.5
15
86
9
56
69
5
2
22
1.22
20907--20932
8
3.2
8
100
0
52
34
38
11
15
1.83
27435--27476
20
2.1
20
100
0
84
14
38
4
42
1.66
35090--35125
12
3.0
12
87
0
54
38
22
5
33
1.77
35057--35109
23
2.2
24
86
10
72
32
22
5
39
1.78
35427--35588
64
2.5
64
81
6
177
30
16
19
32
1.94
41934--41969
12
3.0
12
87
0
54
38
22
5
33
1.77
41901--41953
23
2.2
24
86
10
72
32
22
5
39
1.78
42276--42432
64
2.5
63
84
4
181
28
17
20
33
1.96
54077--54101
13
1.9
13
100
0
50
8
16
48
28
1.74
54785--54827
11
3.9
11
82
11
61
81
6
2
9
0.95
54785--54827
21
2.0
22
82
13
54
81
6
2
9
0.95
54785--54827
10
4.0
10
80
14
50
81
6
2
9
0.95
54999--55046
24
2.0
23
84
11
62
68
0
6
25
1.12
55088--55118
2
15.5
2
100
0
62
51
0
0
48
1.00
59724--59803
40
2.0
40
85
7
110
57
5
2
35
1.34

Tables:   1

The End!