Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007032.1 Hibiscus syriacus cultivar Beakdansim tig00018205_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  83163

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1842--1887
23
2.0
23
86
0
65
21
15
34
28
1.94
10881--11089
75
2.8
75
85
1
267
22
31
15
31
1.95
29133--29166
17
2.0
17
88
0
50
0
41
2
55
1.15
29431--29481
24
2.1
25
85
10
70
50
3
1
43
1.31
39671--39730
29
2.1
29
87
6
86
48
21
11
18
1.80
46949--47023
38
2.0
37
87
5
107
48
4
0
48
1.20
51319--51351
16
2.1
16
94
0
57
42
18
15
24
1.88
53535--53597
27
2.3
27
91
0
108
55
6
3
34
1.41
57335--57370
2
18.0
2
100
0
72
50
0
0
50
1.00
62722--62894
86
2.0
87
90
1
276
46
2
17
34
1.61
62903--62937
15
2.2
16
90
5
54
51
0
0
48
1.00
63317--63382
20
3.3
20
89
0
105
33
25
9
31
1.87
66199--66327
68
1.9
68
95
0
231
27
22
24
26
2.00
75504--75547
18
2.4
19
84
3
54
27
22
18
31
1.97
80980--81030
26
1.9
27
84
11
70
49
1
0
49
1.12
80551--81370
344
2.4
341
90
5
1285
43
5
5
45
1.49

Tables:   1

The End!