Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007033.1 Hibiscus syriacus cultivar Beakdansim tig00018213_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75069

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4343--4382
18
2.2
18
86
0
53
67
5
5
22
1.30
9995--10038
23
2.0
22
81
4
52
50
4
2
43
1.35
19850--19877
14
2.0
14
100
0
56
35
14
7
42
1.73
21394--21454
16
3.8
16
76
4
52
52
16
11
19
1.74
21951--21984
2
17.0
2
100
0
68
50
0
0
50
1.00
24388--24444
23
2.5
23
85
0
69
24
24
28
22
2.00
24464--24784
103
3.1
103
96
0
588
37
23
13
26
1.91
29737--29797
23
2.7
23
89
0
95
26
27
26
19
1.99
29813--30133
103
3.1
103
91
0
527
37
23
13
26
1.91
35311--35336
3
8.7
3
100
0
52
34
0
0
65
0.93
35612--35658
19
2.4
20
80
20
55
38
4
0
57
1.18
35917--35977
31
2.0
31
93
6
106
40
0
18
40
1.50
43030--43070
15
2.6
16
78
21
50
48
0
0
51
1.00
44427--44482
26
2.2
25
87
3
76
23
10
3
62
1.43
48832--48873
21
2.0
21
86
4
59
45
19
11
23
1.83
60678--60725
24
2.0
23
84
11
62
25
6
0
68
1.12
60894--60932
10
4.0
10
86
6
62
10
2
7
79
1.02
60894--60952
29
2.1
29
87
3
84
11
5
6
76
1.14
64310--64356
23
2.0
23
100
0
94
38
27
12
21
1.90

Tables:   1

The End!