Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007036.1 Hibiscus syriacus cultivar Beakdansim tig00018239_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73984

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15381--15426
14
3.3
14
79
11
58
50
15
0
34
1.44
18571--18605
18
1.9
18
88
0
52
14
0
40
45
1.45
23326--23364
20
2.0
20
89
0
60
28
7
20
43
1.79
35613--37253
106
15.5
106
92
1
2655
33
25
18
23
1.97
37787--37829
16
2.8
14
78
21
50
46
0
0
53
1.00
39111--39135
11
2.3
11
100
0
50
16
0
0
84
0.63
39160--39193
3
11.3
3
87
12
52
29
0
0
70
0.87
39160--39195
19
1.9
18
94
5
63
30
0
0
69
0.89
55650--55674
2
12.5
2
100
0
50
48
0
0
52
1.00
62096--62562
158
3.0
157
85
5
574
28
18
5
47
1.70
66487--66538
18
2.9
18
97
0
95
23
13
9
53
1.68

Tables:   1

The End!