Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007038.1 Hibiscus syriacus cultivar Beakdansim tig00018241_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65388

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1428--1466
20
2.0
19
95
5
69
20
41
25
12
1.88
1842--1875
14
2.4
14
95
0
59
14
17
23
44
1.86
4907--5209
83
3.6
83
86
2
426
26
18
19
34
1.95
12181--12216
3
12.3
3
94
5
65
69
0
0
30
0.89
12277--12343
18
4.0
17
73
13
59
74
8
1
14
1.13
12304--12377
14
5.2
14
73
12
62
77
6
1
14
1.05
12312--12377
28
2.4
26
82
10
78
77
7
1
13
1.05
12300--12377
9
8.4
9
74
13
52
76
6
1
15
1.04
12315--12367
22
2.6
19
88
8
70
75
9
0
15
1.04
12279--12392
51
2.3
49
81
14
128
75
7
2
14
1.13
12591--12653
5
13.2
5
73
15
53
76
0
3
20
0.93
12576--12623
20
2.4
19
76
13
51
77
0
6
16
0.97
12601--12653
14
3.9
13
79
13
54
75
0
3
20
0.96
14526--14601
15
5.5
13
78
18
75
76
0
3
19
0.94
14533--14598
15
4.5
14
80
16
80
75
0
4
19
0.97
14528--14605
20
4.1
19
70
17
72
75
0
3
20
0.95
14526--14604
29
2.8
28
94
5
142
75
0
3
20
0.95
14783--14870
25
3.5
25
96
0
158
51
19
7
21
1.72
16897--16957
22
2.8
22
97
0
113
29
16
24
29
1.96
16998--17045
17
2.8
17
96
0
87
25
22
27
25
2.00
17475--17515
21
2.0
21
95
0
73
34
29
4
31
1.79
19237--19269
12
2.6
13
90
4
50
45
6
12
36
1.66
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19597--19654
23
2.7
21
79
10
71
37
17
15
29
1.90
28547--28580
17
1.9
17
88
5
50
79
14
0
5
0.91
31985--32009
10
2.5
10
100
0
50
84
8
0
8
0.79
31974--32007
17
1.9
17
88
5
50
79
14
0
5
0.91
37088--37158
19
3.7
19
81
5
72
19
23
29
26
1.98
37169--37222
7
7.9
7
89
4
83
14
24
29
31
1.95
37169--37222
27
2.0
28
88
3
83
14
24
29
31
1.95
38768--38814
21
2.2
21
100
0
94
23
34
0
42
1.54
41178--41211
17
1.9
17
88
5
50
79
14
0
5
0.91
42395--42431
19
1.9
19
88
0
56
45
2
2
48
1.30
42661--42714
18
2.9
19
76
15
51
59
0
1
38
1.08
44530--44675
59
2.5
60
80
2
152
19
23
35
21
1.96
51843--52012
86
2.0
87
85
1
234
27
17
27
27
1.98
58025--58105
40
2.0
40
95
4
146
28
9
16
45
1.79
60600--60671
37
1.9
37
86
5
101
27
1
9
61
1.36

Tables:   1

The End!