Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007039.1 Hibiscus syriacus cultivar Beakdansim tig00018242_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57169

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12050--12097
19
2.5
20
83
10
64
62
0
2
35
1.07
12780--12835
19
3.1
19
66
23
57
28
5
7
58
1.46
12763--12835
35
2.1
35
100
0
146
27
5
6
60
1.45
12764--12822
16
3.6
16
69
22
50
28
5
3
62
1.32
12831--12874
16
2.8
16
92
0
70
36
0
20
43
1.52
13958--14124
60
2.7
60
81
9
151
35
16
3
44
1.66
14008--14124
61
1.9
62
86
8
168
34
19
5
41
1.74
15116--15175
2
30.5
2
96
3
113
48
0
0
51
1.00
26196--26541
31
11.0
31
73
5
284
33
19
16
30
1.94
26197--26544
63
5.5
63
91
0
536
32
19
16
30
1.94
29575--29616
17
2.5
17
100
0
84
35
23
26
14
1.93
33828--33858
16
1.9
16
100
0
62
29
12
25
32
1.93
39817--39923
32
3.4
32
67
5
92
36
14
15
32
1.89
42640--43109
20
23.2
20
79
11
437
38
25
20
15
1.91
43204--43255
6
8.7
6
100
0
104
32
50
17
0
1.47
43749--43858
6
18.5
6
99
0
213
0
16
50
32
1.45
43950--44406
62
7.4
61
80
11
443
17
19
25
37
1.93
43950--44408
20
22.2
20
75
13
398
17
19
25
37
1.93
43950--44408
42
11.1
40
80
10
377
17
19
25
37
1.93
46040--46078
19
2.0
21
85
10
55
35
10
23
30
1.88
49991--50065
38
1.9
40
91
5
127
60
1
1
37
1.14
51689--51723
15
2.3
15
90
5
52
17
40
22
20
1.92

Tables:   1

The End!