Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007040.1 Hibiscus syriacus cultivar Beakdansim tig00018249_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68956

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6526--6586
23
2.7
23
85
5
72
37
18
6
37
1.76
6983--7108
39
3.2
39
97
0
234
17
13
20
48
1.81
7368--7404
18
2.1
18
89
0
56
51
10
5
32
1.60
7649--7699
25
2.0
25
92
0
84
39
19
7
33
1.81
7974--8036
23
2.8
23
80
2
74
39
19
6
34
1.77
8400--8462
23
2.7
23
90
0
90
38
19
6
36
1.77
10290--10355
33
2.0
33
90
0
105
22
48
0
28
1.51
10389--10453
21
3.1
21
80
6
69
15
29
15
40
1.88
12681--12721
19
2.4
17
81
18
57
19
17
12
51
1.76
12686--12730
19
2.3
19
88
3
72
17
17
11
53
1.72
12960--13404
225
2.0
225
92
3
743
39
7
8
45
1.62
16311--16363
24
2.2
24
80
3
63
16
18
20
43
1.88
16377--16419
3
15.0
3
80
9
54
60
0
0
39
0.97
16377--16422
11
4.1
11
88
5
65
60
0
0
39
0.97
18134--18189
28
2.0
28
86
3
78
42
3
3
50
1.37
18147--18362
37
5.8
37
80
13
221
43
3
6
46
1.45
18093--18215
64
1.9
65
84
1
167
43
3
6
47
1.45
18147--18367
75
3.0
73
82
12
258
44
3
6
45
1.45
18346--18426
30
2.5
32
88
7
112
46
1
4
46
1.32
18161--18425
37
7.5
35
75
16
129
44
2
6
46
1.42
19675--19722
20
2.3
20
96
3
87
31
10
0
58
1.32
19834--19907
4
19.2
4
73
13
50
18
2
4
74
1.10
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23581--23619
20
2.0
20
95
5
71
56
5
0
38
1.22
24291--24329
8
4.6
8
87
9
51
43
0
2
53
1.14
25982--26111
50
2.6
51
87
11
173
21
30
29
18
1.97
28534--28574
10
4.1
10
84
12
57
39
0
29
31
1.57
28695--28792
50
2.0
50
81
4
117
23
29
30
16
1.96
28717--28820
50
2.1
50
83
0
127
21
28
32
17
1.96
34056--34089
16
2.0
16
88
11
50
35
0
0
64
0.94
34224--34275
25
2.0
27
85
10
74
44
0
3
51
1.19
34224--34289
24
2.7
23
80
15
62
48
1
3
46
1.26
34632--34692
16
3.8
16
86
0
95
57
21
11
9
1.62
34861--34892
16
2.0
16
93
0
55
46
25
15
12
1.81
34927--34967
11
3.6
11
80
6
55
24
26
19
29
1.98
34902--34967
24
2.8
24
86
2
80
27
25
21
25
1.99
35827--35888
24
2.6
24
86
0
88
51
22
14
11
1.74
35834--35889
14
4.3
14
73
17
57
50
23
16
10
1.76
44126--44171
20
2.3
20
92
0
74
41
8
4
45
1.55
49622--49654
16
2.0
17
94
5
59
36
21
6
36
1.78
56750--56830
31
2.6
31
94
1
137
13
11
6
69
1.36

Tables:   1

The End!