Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007049.1 Hibiscus syriacus cultivar Beakdansim tig00018275_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69502

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6315--6349
15
2.2
16
90
10
54
48
14
0
37
1.44
7675--7716
15
2.9
15
80
16
52
35
0
4
59
1.19
12961--13010
19
2.6
19
96
0
91
52
2
0
46
1.12
18363--18435
2
36.5
2
100
0
146
50
0
0
49
1.00
18865--18941
7
10.7
7
82
14
86
33
0
0
66
0.92
18836--18919
35
2.3
35
81
8
96
34
1
0
64
1.02
18893--18962
29
2.4
29
83
7
88
38
0
0
61
0.96
39840--39920
11
7.6
11
80
15
75
49
1
1
48
1.17
39897--39949
19
2.8
18
80
5
61
54
1
0
43
1.11
39835--39931
22
4.5
22
74
16
80
49
2
1
47
1.20
40064--40151
42
2.1
41
83
4
113
47
19
7
25
1.76
40313--40351
20
2.0
20
89
0
60
17
12
15
53
1.72
52186--52258
18
3.9
18
75
7
65
31
28
17
21
1.97
52829--52990
64
2.5
64
80
7
170
27
19
19
32
1.97
62570--62667
26
3.7
26
97
1
178
45
14
3
36
1.60
64213--64254
2
21.0
2
95
0
75
50
2
0
47
1.14
67303--67380
32
2.5
31
89
6
113
23
14
6
56
1.61

Tables:   1

The End!