Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000705.1 Hibiscus syriacus cultivar Beakdansim tig00001370_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60318

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1141--1345
64
3.2
64
82
8
235
26
18
24
31
1.97
1704--1752
19
2.6
19
93
0
80
26
34
18
20
1.95
2622--2783
63
2.6
64
78
5
152
35
20
18
25
1.96
10238--10297
23
2.6
23
86
0
84
18
28
28
25
1.98
13501--14011
250
2.0
253
92
3
848
37
9
20
32
1.85
16823--16926
44
2.4
44
86
0
145
30
21
19
28
1.97
17351--17394
13
3.3
14
81
12
65
36
13
6
43
1.71
22358--22385
3
9.3
3
100
0
56
64
0
0
35
0.94
30128--31054
159
5.8
158
82
5
788
21
22
25
31
1.98
30218--31054
318
2.6
316
80
4
873
21
21
25
30
1.98
40076--40101
5
5.2
5
100
0
52
61
0
38
0
0.96
45166--45195
13
2.2
14
94
5
53
20
26
13
40
1.89
47128--47157
15
2.0
15
100
0
60
20
46
13
20
1.83
54205--54266
19
3.4
19
88
4
92
50
0
3
46
1.17
56767--56800
10
3.5
10
84
8
52
70
0
0
29
0.87

Tables:   1

The End!