Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007051.1 Hibiscus syriacus cultivar Beakdansim tig00018280_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  104280

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3955--4038
41
2.0
41
90
0
132
27
19
14
39
1.90
3970--4056
41
2.1
41
80
4
95
31
18
13
36
1.90
12726--12814
30
3.0
30
76
0
88
41
11
7
39
1.70
13117--13154
17
2.2
17
86
13
60
31
0
5
63
1.17
13120--13157
18
2.2
18
95
4
69
34
0
5
60
1.19
13199--13254
26
2.2
26
80
6
60
32
1
8
57
1.40
13211--13262
26
2.0
26
96
0
95
23
3
9
63
1.41
14185--14227
3
14.3
3
100
0
86
32
0
0
67
0.91
16368--16454
26
3.3
26
98
0
165
56
6
4
32
1.46
16621--16655
17
2.1
16
89
5
52
45
2
0
51
1.16
17203--17232
9
3.3
9
100
0
60
30
0
70
0
0.88
18930--18955
2
13.0
2
100
0
52
50
0
0
50
1.00
21326--21368
21
2.0
21
90
0
68
32
27
23
16
1.96
21396--21433
20
1.9
20
88
0
58
23
34
31
10
1.89
21915--22132
103
2.1
103
96
0
409
23
12
25
38
1.90
22149--22211
23
2.7
23
80
9
67
22
22
26
28
1.99
33100--33128
2
14.5
2
100
0
58
51
0
0
48
1.00
33590--33616
2
13.5
2
100
0
54
48
0
0
51
1.00
35952--36007
23
2.3
23
81
6
67
42
3
1
51
1.29
40167--40195
2
14.5
2
100
0
58
51
0
0
48
1.00
40657--40693
2
18.5
2
100
0
74
48
0
0
51
1.00
44961--45033
36
2.0
36
100
0
146
36
30
10
21
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61690--61748
13
4.8
13
73
12
61
28
0
1
69
0.98
61694--61742
15
3.1
16
85
8
57
30
0
2
67
1.02
61690--61739
21
2.5
20
90
3
73
30
0
2
68
1.01
62003--62066
28
2.3
28
78
13
69
71
1
0
26
0.94
82625--82847
112
2.0
113
85
7
310
32
13
17
36
1.88
87526--87586
28
2.1
30
77
22
69
65
1
0
32
1.02
87541--87594
23
2.2
25
87
9
76
66
1
0
31
1.02
87795--87842
24
1.9
24
87
8
69
41
0
0
58
0.98
87795--87842
13
3.9
12
76
13
53
41
0
0
58
0.98
88950--88995
24
1.9
24
86
8
67
52
6
2
39
1.40
88973--89034
32
2.0
31
83
3
79
48
9
3
38
1.52
92020--92045
12
2.2
12
100
0
52
30
7
30
30
1.85
94998--95039
11
3.8
11
75
12
50
40
11
19
28
1.87
94992--95037
22
2.1
22
95
0
83
45
13
15
26
1.82
102122--102153
3
10.7
3
100
0
64
34
65
0
0
0.93
102824--103062
116
2.1
115
85
4
320
37
25
12
24
1.90

Tables:   1

The End!