Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007054.1 Hibiscus syriacus cultivar Beakdansim tig00018292_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67903

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
409--535
57
2.2
56
82
13
145
41
6
17
34
1.75
16479--16537
29
2.0
29
100
0
118
38
13
10
37
1.79
17452--17529
31
2.5
31
87
6
106
38
20
7
33
1.81
20669--20706
19
2.1
18
85
9
51
42
21
0
36
1.53
24297--24336
2
20.0
2
100
0
80
50
0
0
50
1.00
28100--28124
5
5.0
5
100
0
50
80
0
0
20
0.72
30557--30617
31
2.0
31
90
0
95
50
11
9
27
1.70
38909--38949
14
3.0
13
89
10
64
46
2
7
43
1.44
43496--43544
22
2.2
22
82
7
64
32
30
28
8
1.86
45159--45461
103
2.9
103
96
0
543
27
13
23
36
1.92
45491--45558
23
3.0
23
91
0
100
20
27
26
25
1.99
47129--47175
19
2.4
19
85
3
58
65
4
2
27
1.22
59812--59931
21
5.8
20
87
7
138
23
22
22
31
1.98
59812--59926
42
2.8
40
87
9
167
21
22
23
32
1.98
59989--60309
21
15.6
21
81
11
355
34
23
21
20
1.97
59989--60190
103
2.0
104
96
1
379
34
23
22
19
1.97
60035--60309
40
6.8
40
85
8
218
34
23
21
21
1.97
60010--60327
103
3.1
100
83
10
328
34
23
21
20
1.97
61247--61295
24
2.0
25
84
11
66
38
10
2
48
1.48
62890--62925
18
2.0
18
88
0
54
16
19
8
55
1.66
64773--64808
13
2.7
13
95
4
63
13
5
8
72
1.27
64853--64983
65
2.0
65
92
2
219
33
6
8
51
1.59
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65576--65631
21
2.7
20
81
10
58
30
1
7
60
1.33
65865--65889
11
2.3
11
100
0
50
72
0
0
28
0.86
66376--66437
31
2.0
30
90
3
97
30
12
25
30
1.93

Tables:   1

The End!